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    3. Setting up a Payroll System – A 10 Step Guide for Small Business»

    Setting up a Payroll System – A 10 Step Guide for Small Business

    Caron Beesley
    Finance

    Whether you have one employee or 50, setting a payroll system not

    only streamlines your ability to stay on top of your legal and

    regulatory responsibilities as an employer, it can also save you time

    and help protect you from incurring costly IRS penalties (according to Inc.com, the IRS typically

    penalizes one out of every three business owners for payroll errors).

    Here are 10 steps to help you set up a payroll system for your small

    business.

    1. Obtain an Employer Identification Number

    (EIN)

    Before hiring employees, you need to get an employment identification

    number (EIN) from the IRS. The EIN is often referred to as an Employer

    Tax ID or as Form SS-4. The EIN is necessary for reporting taxes and

    other documents to the IRS. In addition, the EIN is necessary when

    reporting information about your employees to state agencies. You can apply for an EIN online or contact

    the IRS directly.

    2. Check Whether You Need State/Local IDs

    Some states/local governments require businesses to obtain ID numbers

    in order to process taxes. Check whether this applies in your state

    with this State Tax Guide.

    3. Independent Contractor or Employee - Know

    the Difference

    Be clear on the distinction between an independent contractor and an

    employee. In legal terms, the line between the two is not always clear

    and it affects how you withhold income taxes, withhold and pay Social

    Security and Medicare taxes, and pay unemployment taxes. Business.gov

    offers guidance on the distinction in this Guide to Hiring Independent Contractors.

    4. Take Care of Employee Paperwork

    New employees must fill out Federal Income Tax Withholding Form W-4. Your employee must complete the form and

    return it to you so that you can withhold the correct federal income tax

    from their pay (the IRS provides guidance on how to do this as well as

    how to report withholdings and taxes at the end of the year in this Employment Tax Guide).

    5. Decide on a Pay Period

    You may already have a manual process for this, but setting up a

    pay-period (whether monthly or bi-monthly) is sometimes determined by state law with most favoring bi-monthly payments. The

    IRS also requires that you withhold income tax for that time period

    even if your employee does not work the full period.

    6. Carefully Document Your Employee

    Compensation Terms

    As you set-up payroll, you’ll also want to consider how you handle paid time off (not a legal

    requirement, but offered by most businesses), how you track employee

    hours, if and how you pay overtime, and other business variables. For

    more on Fair Labor Law, and how it impacts overtime pay, etc. check out

    Business.gov’s guide to wage and hour laws.

    Don’t forget that other employee compensation and business

    deductibles such as health plan premiums and retirement contributions

    will also need to be deducted from employee pay checks and paid to the

    appropriate organizations. 

    7. Choosing a Payroll System

    Payroll administration requires an acute attention to detail and

    accuracy, so it’s worth doing some research to understand your options.

    Start by asking fellow business owners which method they use and if they

    have any tips for setting up and administering payroll.

    Typically, your options for managing payroll include the following

    in-house or outsourced options (remember whichever option you choose,

    you, as the employer, are responsible for reporting and payment of all

    payroll taxes):

    • Commercial Accounting Software - There

      are many basic desktop software applications and online services that

      small businesses can use in-house to manage check processing, direct

      deposits, and tax collection. These include Sage

      Peachtree, Intuit Online Payroll, PayChex Online Payroll, and ADP (who are now branching out into

      the small business market). Just be careful that you purchase only the

      options you need and make sure you understand if these services "impound" payroll taxes or let you keep them until they are due for

      payment.

    • Outsource to an Accountant or Payroll Service -

      If you want to take the matter of payroll administration out of your

      hands, consider outsourcing to an accounting service. This article from

      Inc.com - How to Choose a Payroll Service -

      offers tips on saving time and money by outsourcing payroll. For advice

      on choosing an accountant, read this article on Business.gov: Selecting a Small Business Accountant.

    8. Running Payroll

    Once you have all your forms and information collated you can start

    running payroll. Depending on which payroll system you choose you’ll

    either enter it yourself or give the information to your accountant.

    9. Get Record Keeping Savvy

    Federal and some state laws require that employers keep certain

    records for specified periods of time. For example, W-4 forms (on which

    employees indicate their tax withholding status) must be kept on file

    for all active employees and for four years after an employee is

    terminated.   You also need to keep W-2s, copies of filed tax forms and

    dates, and amounts of all tax deposits. Read more about setting up records for withholding taxes

    (refer to Step 3). For record keeping tips read, I Keep Good Records - But How Long

    Should I Keep Them For?

    10. Report Payroll Taxes

    There are several payroll tax reports that you are required to submit

    to the appropriate authorities on either a quarterly or annual basis.

    Generally, each quarter, employers who pay wages subject to income

    tax withholding, social security, and Medicare taxes must file IRS Form 941, Employer's Quarterly Tax Return. Small

    businesses with an annual income tax liability of $1,000 or less may

    file IRS Form 944, Employer's Annual Federal Tax Return

    instead of Form 941.

    You must also file IRS Form 940, Employer's Annual Federal

    Unemployment (FUTA) Tax Return, if you paid wages of $1,500 or more in

    any calendar quarter or you had one or more employees work for you in

    any 20 or more different weeks of the year.

    If you are in any way confused about your obligations, take a look at

    the IRS's Employer's Tax Guide, which provides

    some very clear guidance on all federal tax filing requirements.

    Visit your state tax agency for specific tax

    filing requirements for employers.

    Additional Resources

    • 10 Regulatory Steps You Must Follow When

      Hiring Your First Employee

    • Handling Employer Tax Responsibilities - Legal and small business expert Barbara Weltman provides a brief

      outline of what you need to do to stay compliant.

    • Employee Benefit Plans - What’s Law and

      What’s Optional

      - An overview of the basic employee benefits that

      the law requires you to provide, as well as guidance on setting up a

      more comprehensive plan.

    • IRS Employer’s Tax Guide - Includes

      end-to-end information about setting up, reporting and managing payroll

      taxes

    • IRS Guide to Outsourcing Payroll and

      Third Party Payers

      - Explains the legalities of outsourcing payroll

      as well as the obligations you continue to maintain as an employer.

    Small Business Matters is brought to you by Business.gov to provide helpful and easy-to-understand tips for small and home businesses, including direct links to resources that help business owners to navigate the government maze.  Business.gov is sponsored by the U.S. Small Business Administration to provide small business owners with access to federal, state and local government resources from a single access point. Business.gov creates a dialogue among business owners and the organizations serving them, making government resources and information more accessible to the nation's small business community.  The U.S. Government and the U.S. Small Business Administration neither endorses nor guarantees in any way the external organizations, services, advice, or products included in any external website links. Furthermore, the U.S. government neither controls nor guarantees the accuracy, relevance, timeliness or completeness of the information contained in non-government website links.

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    Profile: Caron Beesley

    Caron Sharp has over 14 years of experience working in marketing, with a particular focus on the government sector. She writes the Government Resources for Business blog on AllBusiness.

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